By Takuya Kida, Masayuki Takeda, Ayumi Shinohara (auth.), Maxime Crochemore, Mike Paterson (eds.)
This booklet constitutes the refereed lawsuits of the tenth Annual Symposium on Combinatorial trend Matching, CPM ninety nine, held in Warwick, united kingdom in July 1999. The 21 revised papers offered have been rigorously reviewed and chosen from 26 submissions. The papers handle all present concerns in combinatorial development matching facing a number of classical items like bushes, standard expressions, graphs, element units, and arrays in addition to with DNA/RNA coding, WWW concerns, details retrieval, facts compression, and development attractiveness.
Read or Download Combinatorial Pattern Matching: 10th Annual Symposium, CPM 99 Warwick University, UK, July 22–24, 1999 Proceedings PDF
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Additional info for Combinatorial Pattern Matching: 10th Annual Symposium, CPM 99 Warwick University, UK, July 22–24, 1999 Proceedings
However, there is a positive result. Searching the compressed file with this algorithm is twice as fast as decompressing it and then searching the uncompressed file. For this comparison we are assuming that the file is compressed with LZ77 (which is much faster than LZ78 to decompress) and consider the time of gunzip, which is an optimized decompression software. Hence, if the text collection is kept compressed (which is definitely of interest) then it is much faster to search directly the compressed files.
Of Computer Science, Univ. of Chile, 1998.  D. Sunday. A very fast substring search algorithm. Communications of the ACM, 33(8):132–142, August 1990.  T. A. Welch. A technique for high performance data compression. IEEE Computer Magazine, 17(6):8–19, June 1984.  I. Witten, R. Neal, and J. Cleary. Arithmetic coding for data compression. Communications of the ACM, 30(6):520–541, 1987.  M. Zipstein. Data compression with factor automata. Theor. Comput. , 92(1):213–221, 1992.  J.
46% Table 1. Estimated compression ratios with three different methods. For each number in the compressed file, if we note n the bits needed to code it, then Ideal counts only n, Elias-γ counts 2n and Elias-δ counts n + 2 log2 n . The second line (in italics) of English and DNA correspond to Block-LZ77, Mark-LZ78 and Mark-Hybrid, respectively. 20% Table 2. Compression ratios for classical compressors and our byte versions. The second (italics) lines of English and DNA correspond to Block-LZ77, Mark-LZ78 and Mark-Hybrid, respectively.
Combinatorial Pattern Matching: 10th Annual Symposium, CPM 99 Warwick University, UK, July 22–24, 1999 Proceedings by Takuya Kida, Masayuki Takeda, Ayumi Shinohara (auth.), Maxime Crochemore, Mike Paterson (eds.)